Fourth PMF Meeting June 21st - 22nd, 2007
|
| Dr. Deborah Ward |
Mr Mark Prescott |
| (General and Vendors) |
(Registration and Dale Hall Accommodation) |
| School of Biological Sciences |
School of Biological Sciences |
| University of Liverpool |
University of Liverpool |
| Crown Street |
Crown Street |
| Liverpool |
Liverpool |
| L69 7ZB |
L69 7ZB |
| Tel: 0151 795 4507/4484 |
Tel: 0151 795 4485 |
| Fax: 0151 795 4406 |
Fax: 0151 795 4406 |
| E-mail: d.ward@liverpool.ac.uk |
E-mail: mp1608@liverpool.ac.uk |
To provide a national, informal forum for groups involved
in protein mass spectrometry and informatics in the UK. Its
focus is upon the practical methods of analysis and sharing of
information between peers. 'Building a community'.
Thursday 21st June 2007
| 12:00 |
Registration, Tea/Coffee and Exhibition by
Proteomics Vendors |
Session 1. Informatics
| 13:00 |
An Overview of Scaffold by a User |
| |
Rebekah Jukes-Jones (MRC — University of Leicester) |
| 13:20 |
Applying active data management and
downstream processing to the shotgun proteomics of
Synechocystis, using multiple workflows and multiple
search engines |
| |
Kevin Jones (Genologics) |
| 13:40 |
Reliable High Throughput Protein
Identification using the Genome Annotating Proteomic
Pipeline |
| |
Conrad Bessant (Cranfield) |
| 14:05 |
Improved Bioinformatics Methods for the
Integration of Proteomics and Microarray
Data |
| |
Crispin Miller (University of Manchester) |
| 14:30 |
Tea/Coffee and Exhibition by Proteomics
Vendors |
Session 1. Informatics continued
| 15:00 |
Data Repositories for Proteomics : Why
Bother? |
| |
Jennifer Siepen (University of Manchester) |
| 15:20 |
An Intuition for Experiment Design |
| |
Martin O'Gorman (Nonlinear) |
Session 2. Specialised Proteomic Applications
| 15:40 |
The application of UPLC and Multiple
Reaction Monitoring to the detection and quantification
of proteins in serum |
| |
Richard Kay (HFL, Cambridge) |
| 16:05 |
Protein Separation for Top-Down Analysis |
| |
Karl Burgess (University of Glasgow) |
| 16:30 |
Tea/Coffee and Exhibition by Proteomics
Vendors |
| 17:00 |
Positional Proteomics : Addressing the
problem of proteome complexity by selective recovery and
analysis of N-terminal peptides |
| |
Lucy McDonald (University of Liverpool) |
| 17:20 |
A Method for the Proteomic Analysis of
Integrin-mediated Protein Complexes |
| |
Adam Byron (Manchester) |
Session 3. Quantification
| 17:40 |
Strategies for multiplexed absolute
quantification |
| |
Rob Beynon (University of Liverpool) |
| 18:10 |
Neutrophil Proteomics in Systemic
Sclerosis |
| |
Theresa Barnes (Liverpool) |
| 18:30 |
Exhibition by Proteomics Vendors |
| 19:00 |
Wine reception in Bar adjacent to
Herculaneum Room |
| 19:30 |
Buffet dinner in Herculaneum Room |
| |
Bar extension until 11.45pm |
Friday 22nd June
Session 3. Quantification continued
| 09:30 |
Proteomics and Metabolomics Combined in
Cardiovascular Research |
| |
Manuel Mayr (Kings College, London) |
| 09:55 |
Adventures with an iTRAQ 8plex Test Kit : A
Collective Experience |
| |
Saw Yen Ow (University of Sheffield) |
| 10:15 |
Label free quantitative proteomics for large
scale biomarker discovery in complex
samples |
| |
Yishai Levin and Emanuel Schwarz (University of Cambridge) |
| 10:40 |
2nd Generation Proteomics : A quantitative
annotation of protein localization, dynamic &
interaction partners |
| |
Michel Boisvert (University of Dundee) |
| 11:10 |
Tea/Coffee and Exhibition by Proteomics
Vendors |
Session 4. Post-translational modifications
| 11:40 |
Multiple Methods for Protein Phosphorylation
Site Analysis by Mass Spectrometry |
| |
Nick Morrice (University of Dundee) |
| 12:10 |
The Role of ETD/ECD in Phosphorylation
Analysis |
| |
Stephen Sweet (University of Birmingham) |
| 12:40 |
Mass spectrometric techniques for glycomics
and glycoproteomics |
| |
Paul Hitchen (Imperial College, London) |
| 13:10 |
Closing Remarks and Future PMFs |
The Forum will be held in the Carnatic Conference Park (http://www.liv.ac.uk/conferenceservices/conferences/carnatic.htm).
The meeting will be at Dale Hall, where accommodation is
also available. Breakfast (first floor), buffet dinner
(Herculaeum Room) and bar facilities are available across the
road in Carnatic House.
A Map and Directions to Carnatic House/Dale Hall can be
downloaded here.
Very limited parking is available at Dale Hall, and across
the road, but there is a large car park available on the far
side of Carnatic House (entrance from North Mossley Hill
Road).
As in previous meetings, registration is free, since we
have secured industrial sponsorship. However, to allow us to
plan, please download and save the Registration form and email a completed version to
Mark Prescott mp1608@liverpool.ac.uk)
by 30th April, 2007.
Dale Hall:
Details of the accommodation available at Dale Hall are
provided on the Accommodation Booking
Form. Please download, print and post the completed form
with payment to Mark Prescott by Friday 18th May, 2007.
Hotels:
Local hotels are available that are close to Dale
Hall/Carnatic House, but all require car transport.
|
| Alicia Hotel, Sefton Park |
0151 727 4411 |
from £55.00 |
| Solna Hotel, Sefton Park |
0151 734 3398 |
from £49.95 |
| The Park Lane Hotel, Sefton Park |
0151 727 4754 |
from £60.00 |
| Innkeepers Lodge, Aigburth Road |
0151 494 1032 |
from £48.00 |
| Marriot Hotel, Speke |
0870 400 7269 |
from £99.00 |
Please book Hotels directly
